Limewire is a filesharing app. and not a media player. Use a mediaplayer to organise/play, and Limewire to download/share. Problem solved

Or like Peerless suggested find out using the explore function in Limewire (find out in the windows folder)

BTW Problem was solved by Peerless on the 3rd. as well (meaning there never was no problem in the first place), which is why noone else answered.

Try a different player if files won't play. Like VLC player www.videolan.org

I would be pretty scared if I was able to play deleted files Would have to be some kind of voodoo involved

Refreshing library will make library be up to date (rehashes entire library)

I understand it is not meant to be a player, but its where the source of the music is. If I delete songs in the player, they will not be deleted in Limwire.
This is why I need some sort of orginization in Limewire which im not getting. Yes when I go to the 'explore' function it shows where the files are, but like I said when I delete them from there, they dont get deleted from the Limewire library.

I orginize all my musice using ITUNES, but again I can find the music through the player easily, just not the source (LW)

Did you not see this ?

This should remove the deleted files from the Limewire library